R&D Tax Credit Process & Documentation
6
Minutes Read
Published
October 7, 2025
Updated
October 7, 2025

How UK biotech startups can maximise R&D tax credits: practical guide for founders

Learn how to claim R&D tax credits for UK biotech startups, including a guide to eligible costs and the HMRC application process for your innovative work.
Glencoyne Editorial Team
The Glencoyne Editorial Team is composed of former finance operators who have managed multi-million-dollar budgets at high-growth startups, including companies backed by Y Combinator. With experience reporting directly to founders and boards in both the UK and the US, we have led finance functions through fundraising rounds, licensing agreements, and periods of rapid scaling.

Understanding R&D Tax Credits for UK Biotech Startups

For UK biotech startups in the pre-seed to Series B stages, managing cash flow is a constant battle. The long, capital-intensive path from discovery to preclinical validation means every pound of funding is critical. Research and Development (R&D) tax credits represent one of the most powerful sources of non-dilutive funding available, directly boosting your runway without giving up equity. Effectively navigating how to claim R&D tax credits for biotech startups in the UK is not just an accounting task; it's a core strategic activity. This guide provides a practical framework for founders to understand the requirements, document their work, and maximise their claim with confidence.

SME vs. RDEC: Choosing the Right R&D Tax Relief Scheme

Before diving into the details, you must know which of the two schemes applies to your company. The UK tax authority, HMRC, offers two primary R&D tax relief schemes: the SME Scheme and the Research and Development Expenditure Credit (RDEC) Scheme. For the vast majority of early-stage biotech companies, the choice is straightforward. The SME Scheme is the default for most startups from pre-seed to Series B, as it is more generous and designed for smaller, innovative companies.

However, a critical exception exists related to your funding sources. If your R&D project has received specific types of grant funding, such as notified state aid, you may be required to claim that project's expenditure under the less generous RDEC scheme. This is a crucial distinction to clarify early on with your finance team or specialist advisors, as it directly impacts the value of your claim.

How to Determine if Your Biotech Work Qualifies for R&D Tax Credits

The most common question founders ask is whether their daily lab work is eligible for biotech R&D tax relief. The answer hinges on a specific definition. According to HMRC, qualifying R&D is work that seeks an 'advance in science or technology' by resolving 'scientific or technological uncertainty'. Your project must aim to create something new or improve upon an existing capability in the field, and it must face challenges that a competent professional cannot easily resolve using existing knowledge.

For a biotech startup, this means it is not about whether the science is complex, but whether it pushes known boundaries. Failed experiments are a hallmark of resolving uncertainty and are therefore just as eligible as successful ones. The key is the documented attempt to overcome a significant scientific challenge. Indeed, failed experiments are commonly cited as strong evidence in successful claims.

Examples of Qualifying vs. Non-Qualifying Biotech R&D

What founders find actually works is to categorise activities clearly from the outset. Here is a simple framework for what is typically eligible for biotech R&D tax relief versus what is not.

Activities That Typically Qualify:

  • Developing a novel gene-editing platform to target a previously untreatable genetic disorder.
  • Creating a new computational model to predict protein folding with higher accuracy than existing methods.
  • Experimenting with new formulations for a drug delivery system to improve bioavailability or overcome stability issues.
  • Synthesising and testing a library of novel small molecules to identify a lead compound against a specific cancer cell line.
  • Activities within a preclinical study designed to resolve uncertainties about a drug candidate's mechanism of action or toxicity.

Activities That Typically Do Not Qualify:

  • Routine quality control testing of a manufactured batch of antibodies using established, industry-standard protocols.
  • Market research to determine the commercial viability or pricing of a new diagnostic tool.
  • Setting up and commissioning standard laboratory equipment, unless its configuration is part of a specific qualifying R&D project.
  • Patent filing and legal costs associated with protecting your intellectual property, though the underlying development work is eligible.
  • General business administration, such as managing payroll, HR, or investor relations activities.

Claiming R&D Expenses UK: What Biotech Costs Are Eligible?

Once you have identified your qualifying R&D projects, the next step is to link them to specific expenditures. This is where meticulous tracking in your accounting system becomes invaluable. The process of claiming R&D expenses in the UK requires mapping your costs to HMRC’s approved categories, which are strict and must be followed carefully.

1. Staffing Costs

This category includes the gross salary, employer’s National Insurance, and employer’s pension contributions for employees directly and actively engaged in the R&D. For team members with mixed roles, such as a CEO splitting time between R&D strategy and fundraising, you must apportion their costs based on a reasonable estimate of their time. For example, if a CEO on a £100,000 salary spends 60% of their time directing R&D, you can include £60,000 of their staffing cost in the claim.

2. Consumables

This covers the cost of materials consumed or transformed in the R&D process. For a biotech, this is often a major category of expenditure, including reagents, cell culture media, enzymes, pipettes, and other essential lab supplies. It is important to note the distinction between capital assets and consumables. You cannot claim for the purchase of a new bioreactor itself, but you can claim for the single-use materials used within it to conduct your qualifying experiments.

3. Subcontracted R&D

Early-stage companies often outsource specific R&D activities to a Contract Research Organisation (CRO) or a university lab. Under the SME scheme rules, claimants can typically include 65% of the payment made to an unconnected subcontractor for qualifying R&D activities. This limitation is a key factor to consider when deciding whether to build internal capabilities or outsource.

4. Externally Provided Workers (EPWs)

If you use agency staff to supplement your in-house R&D team, you can include a portion of their costs. Similar to subcontractors, there is a 65% cap on the qualifying expenditure related to payments made to the staff provider for EPWs under the SME scheme. These workers must be directed by your company but are not on your direct payroll.

5. Software

The cost of software licences required for R&D activities is eligible. This can include specialised bioinformatics platforms, data analysis tools, electronic lab notebooks, or modelling software used directly in your research and development work. General business software like Microsoft Office or accounting platforms such as Xero are typically excluded.

Documenting R&D for Tax Credits: The Technical Narrative

An R&D tax credit claim is more than just a set of numbers; it requires a supporting technical narrative that explains your work to HMRC. The goal is to create documentation that is robust but not overly burdensome. Best practice suggests that the technical narrative supporting a claim is typically 5-10 pages per major project. This document is not a scientific paper, but it must clearly articulate your project in HMRC's terms.

The key is creating 'contemporaneous records'. In a startup, this means using the tools you already have. Your lab notebooks, project plans, and internal technical summaries are all valuable evidence. To build an audit-ready trail, you should clearly define the following for each project:

  • Scientific or Technological Baseline: Describe the state of the art in your field when you started. What knowledge or capabilities were publicly available?
  • Advance Sought: Explain the improvement you were trying to achieve. This must be an advance for the entire field, not just a commercial gain for your company.
  • Scientific or Technological Uncertainties: Detail the specific challenges you faced that could not be readily resolved by a competent professional in the field. This is the core of your claim.
  • Activities Undertaken: Briefly describe the experiments, analysis, and development work you performed to overcome those uncertainties.

By tagging expenses in your accounting software to specific R&D projects and aligning them with these technical records, you create a clear and defensible link between the science and the spend.

How to Calculate Your Claim and Avoid Common Pitfalls

The final step in the R&D tax credit application process is the calculation. For loss-making companies, which includes most preclinical biotech startups, the SME scheme provides a significant cash benefit through 'enhancement' and 'surrender' mechanics.

The calculation follows a clear process:

  1. Identify Total Qualifying R&D Expenditure: Sum all your eligible costs from the categories outlined above.
  2. Apply the Enhancement Rate: This total is increased by an 'enhancement rate'. For the SME scheme, the R&D expenditure 'enhancement' rate is 86%. This enhanced figure increases your company’s tax-deductible costs, creating or deepening a taxable loss.
  3. Surrender the Loss for Cash: As a loss-making business, you can then surrender this loss to HMRC in exchange for a cash payment. For R&D-intensive SMEs (spending at least 30% of total expenditure on R&D), the tax loss can be surrendered for a cash credit at a rate of 14.5%.

For example, if your biotech startup has £100,000 in eligible R&D costs, the enhanced expenditure becomes £186,000 (£100,000 original spend + £86,000 enhancement). Surrendering this loss at the 14.5% rate results in a cash credit of £26,970. This means your £100,000 investment generates a direct cash repayment of nearly £27,000, which can be critical for extending your operational runway.

Common pitfalls to avoid include claiming non-qualifying costs like patent legal fees, poor apportionment of staff time between R&D and commercial activities, and submitting a technical narrative that fails to directly address the 'scientific uncertainty' criteria.

A Practical Checklist for Biotech Founders

For a founder focused on scientific milestones and securing the next funding round, the R&D tax credit process can seem daunting. However, breaking it down into manageable steps makes it a powerful strategic tool.

  1. Confirm Your Scheme: First, confirm you are using the correct scheme, which will almost always be the SME scheme unless you have received specific state-aid grants. You can use a first-time claim checklist to guide you.
  2. Adopt the Right Mindset: Get into the habit of framing projects around the concepts of 'technological advance' and 'resolving uncertainty'. This helps you identify qualifying work as it happens.
  3. Implement Simple Tracking: Use a consistent process for tracking costs. This can be as simple as using project tags in your accounting software for staffing, consumables, and software linked to specific R&D initiatives.
  4. Document as You Go: Do not leave the narrative until the last minute. Encourage your science team to write brief, regular summaries of the challenges they face and the experiments they are running. These notes are the foundation of your technical report.

By embedding these practices into your operations, you transform the tax credit claim from a retrospective accounting exercise into a proactive strategy for funding your innovation. It is one of the most important biotech startup tax incentives in the UK. Continue at the hub for more process and documentation details.

Frequently Asked Questions

Q: Do R&D activities conducted before my company was incorporated qualify?
A: No, only expenditure incurred by the company after its date of incorporation can be included in an R&D tax credit claim. Pre-incorporation costs, even if directly related to the qualifying R&D project, are not eligible for relief under either the SME or RDEC schemes.

Q: What happens if our biotech R&D project ultimately fails?
A: A failed project is just as eligible as a successful one, and sometimes provides stronger evidence for a claim. The relief is based on the attempt to resolve scientific or technological uncertainty, not the achievement of a specific outcome. Documenting the challenges and failed experiments is a key part of the process.

Q: Can we claim R&D tax credits for patent application costs?
A: No, the legal and administrative costs of filing for and maintaining a patent are not qualifying expenditures for R&D tax relief. However, the underlying development work that led to the patentable invention is almost always eligible, as it inherently involves resolving technological uncertainty.

This content shares general information to help you think through finance topics. It isn’t accounting or tax advice and it doesn’t take your circumstances into account. Please speak to a professional adviser before acting. While we aim to be accurate, Glencoyne isn’t responsible for decisions made based on this material.

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